Complete refactor from AccessContext struct to simple accessorID string
parameter for RBAC enforcement, as requested. All access control remains
in lib layer - API/Portal just pass accessor + dossier to lib functions.
Changes:
- Added accessorIDFromContext() helper in lib/v2.go
- Updated all checkAccess() calls to extract accessorID from context
- Updated all EntryList() calls (nil → "" for system context)
- Fixed auth.go helper functions to extract accessorID
- Updated categories API to pass accessor through to lib
All RBAC enforcement stays in lib - no API-level access checks.
Empty accessorID bypasses checks (system/internal operations).
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
- Remove API-level access checks (requireDossierAccess)
- Pass user context to lib functions instead of system context
- Single enforcement point: lib.EntryList/EntryGet/etc check access
- Fixes EnsureCategoryEntry to use EntryWrite (correct function name)
All access control now happens at the lowest level in lib.
API and MCP layers just pass context through.
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
- EnsureCategoryEntry: creates category entry if needed
- GrantAccess: creates access grant with cache invalidation
- RevokeAccess: removes grant with cache invalidation
Category entries are automatically created when granting category-level access.
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
- Remove special cat:{id} handling from permission resolution
- Categories are now just entries with parent_id=""
- Access flows naturally through parent_id chain hierarchy
- Three levels: root (entry_id="") > categories > individual entries
- Explicit denial supported with ops=""
- Updated documentation to reflect cleaner model
Next: deprecate dossier_access table, migrate to access grants
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
- Updated all genome functions to accept AccessContext parameter
- GenomeGetExtraction, GenomeGetTiers, GenomeGetTierByCategory,
GenomeGetVariants, GenomeGetVariantsByTier now pass context to EntryList
- API genome handler uses system context after dossier access check
- Categories endpoint uses system context for counting operations
- Fixes MCP query_genome returning 403/no data errors
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
James
Johan