inou/api/api_categories.go

package main

import (
	"encoding/json"
	"net/http"
	"strings"

	"inou/lib"
)

type CategoryCount struct {
	Shown  int `json:"shown"`
	Hidden int `json:"hidden"`
}

func handleCategories(w http.ResponseWriter, r *http.Request) {
	// Get accessor (who is asking)
	ctx := getAccessContextOrFail(w, r)
	if ctx == nil {
		return
	}

	dossierHex := r.URL.Query().Get("dossier")
	if dossierHex == "" {
		http.Error(w, "missing dossier", http.StatusBadRequest)
		return
	}
	dossierID := dossierHex

	obsType := r.URL.Query().Get("type")
	category := r.URL.Query().Get("category")

	// Pass accessor + dossier to lib - RBAC handled there
	var counts map[string]CategoryCount

	if obsType == "" {
		counts = getTopLevelCounts(ctx.AccessorID, dossierID)
	} else if obsType == "genome" {
		if category != "" {
			counts = getGenomeSubcategoryCounts(ctx.AccessorID, dossierID, category)
		} else {
			counts = getGenomeCounts(ctx.AccessorID, dossierID)
		}
	} else {
		counts = make(map[string]CategoryCount)
	}

	w.Header().Set("Content-Type", "application/json")
	json.NewEncoder(w).Encode(counts)
}

func getTopLevelCounts(accessorID, dossierID string) map[string]CategoryCount {
	counts := make(map[string]CategoryCount)

	categoryNames := map[int]string{
		1: "imaging", 2: "documents", 3: "labs", 4: "genome",
	}

	// Check each category - only include if accessor has access
	for catInt, catName := range categoryNames {
		// Try to get a count by querying entries with RBAC
		entries, err := lib.EntryList(accessorID, "", catInt, &lib.EntryFilter{
			DossierID: dossierID,
			Limit:     1, // Just check if we can see any
		})
		if err != nil || len(entries) == 0 {
			continue // No access or no entries
		}

		// Get actual count (using system context for counting only)
		var catCounts []struct {
			Count int `db:"cnt"`
		}
		lib.Query("SELECT COUNT(*) as cnt FROM entries WHERE dossier_id = ? AND category = ?",
			[]any{dossierID, catInt}, &catCounts)

		if len(catCounts) > 0 && catCounts[0].Count > 0 {
			counts[catName] = CategoryCount{Shown: catCounts[0].Count, Hidden: 0}
		}
	}

	// For genome, replace with detailed subcategory counts
	genomeCats := getGenomeCounts(accessorID, dossierID)
	if len(genomeCats) > 0 {
		totalShown, totalHidden := 0, 0
		for _, c := range genomeCats {
			totalShown += c.Shown
			totalHidden += c.Hidden
		}
		counts["genome"] = CategoryCount{Shown: len(genomeCats), Hidden: totalHidden}
	}

	return counts
}

// variantData for parsing the data JSON
type variantData struct {
	Mag float64 `json:"mag"`
	Rep string  `json:"rep"`
	Sub string  `json:"sub"`
}

// shouldIncludeVariant returns true if the variant should be counted/shown
func shouldIncludeVariant(data variantData, includeHidden bool) bool {
	if includeHidden {
		return true
	}
	// Hide high magnitude variants
	if data.Mag > 4.0 {
		return false
	}
	// Hide "Bad" repute variants
	if data.Rep == "Bad" || data.Rep == "bad" {
		return false
	}
	return true
}

// getGenomeCounts reads cached counts from the extraction entry (fast path)
func getGenomeCounts(accessorID, dossierID string) map[string]CategoryCount {
	counts := make(map[string]CategoryCount)

	// Create access context for RBAC
	ctx := &lib.AccessContext{AccessorID: accessorID}

	// Find extraction entry and read its data
	extraction, err := lib.GenomeGetExtraction(ctx, dossierID)
	if err != nil {
		return counts
	}

	if extraction.Data == "" {
		return counts
	}

	// Parse extraction data which contains pre-computed counts
	var extractionData struct {
		Counts map[string]CategoryCount `json:"counts"`
	}
	if err := json.Unmarshal([]byte(extraction.Data), &extractionData); err != nil {
		return counts
	}

	// Return cached counts if available
	if extractionData.Counts != nil {
		return extractionData.Counts
	}

	// Fallback: compute counts (for old data without cached counts)
	return getGenomeCountsSlow(accessorID, dossierID)
}

// getGenomeCountsSlow computes counts by scanning all variants (fallback for old data)
func getGenomeCountsSlow(accessorID, dossierID string) map[string]CategoryCount {
	counts := make(map[string]CategoryCount)

	// Create access context for RBAC
	ctx := &lib.AccessContext{AccessorID: accessorID}

	// Find extraction entry
	extraction, err := lib.GenomeGetExtraction(ctx, dossierID)
	if err != nil {
		return counts
	}

	// Get all tiers
	tiers, err := lib.GenomeGetTiers(ctx, dossierID, extraction.EntryID)
	if err != nil {
		return counts
	}

	// For each tier, count shown and hidden variants
	for _, tier := range tiers {
		variants, err := lib.GenomeGetVariantsByTier(ctx, dossierID, tier.TierID)
		if err != nil {
			continue
		}
		shown, hidden := 0, 0
		for _, v := range variants {
			data := variantData{
				Mag: v.Magnitude,
				Rep: v.Repute,
				Sub: v.Subcategory,
			}
			if shouldIncludeVariant(data, false) {
				shown++
			} else {
				hidden++
			}
		}
		if shown > 0 || hidden > 0 {
			counts[tier.Category] = CategoryCount{Shown: shown, Hidden: hidden}
		}
	}

	return counts
}

func getGenomeSubcategoryCounts(accessorID, dossierID string, category string) map[string]CategoryCount {
	counts := make(map[string]CategoryCount)
	shownCounts := make(map[string]int)
	hiddenCounts := make(map[string]int)

	// Create access context for RBAC
	ctx := &lib.AccessContext{AccessorID: accessorID}

	// Find extraction entry
	extraction, err := lib.GenomeGetExtraction(ctx, dossierID)
	if err != nil {
		return counts
	}

	// Find tier for this category
	tier, err := lib.GenomeGetTierByCategory(ctx, dossierID, extraction.EntryID, category)
	if err != nil {
		return counts
	}

	// Get variants and count by subcategory
	variants, err := lib.GenomeGetVariantsByTier(ctx, dossierID, tier.TierID)
	if err != nil {
		return counts
	}

	for _, v := range variants {
		if v.Subcategory == "" {
			continue
		}
		data := variantData{
			Mag: v.Magnitude,
			Rep: v.Repute,
			Sub: v.Subcategory,
		}
		if shouldIncludeVariant(data, false) {
			shownCounts[v.Subcategory]++
		} else {
			hiddenCounts[v.Subcategory]++
		}
	}

	// Combine into CategoryCount
	allSubs := make(map[string]bool)
	for k := range shownCounts {
		allSubs[k] = true
	}
	for k := range hiddenCounts {
		allSubs[k] = true
	}
	for sub := range allSubs {
		counts[sub] = CategoryCount{Shown: shownCounts[sub], Hidden: hiddenCounts[sub]}
	}

	return counts
}

// Unused but keeping for compatibility - remove if not needed
var _ = strings.Contains