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James a2141bb5d3 Checkpoint: all pending changes across lib, portal, api, tools 
Extraction prompts refined, dossier sections expanded, MCP tools
enhanced, genome/oauth/upload improvements, health-poller added,
import-genome removed, landing/pricing/dashboard template updates,
carousel images, consent/docs templates, rquery/dbquery tools,
CLAUDE.md and docs updates.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
 		2026-03-11 23:37:44 -04:00
..
examples Portal: upload handler, dossier rework, dashboard updates, normalize fixes 2026-02-25 20:01:11 -05:00
soc2 fix: genome query RBAC - use system context for data access 2026-02-07 16:31:17 -05:00
._.DS_Store Initial commit from dev 2026-02-01 08:03:12 +00:00
CODE-REVIEW-2026-02-28.md Code review 2026-02-28: fix critical/high findings + full review report 2026-02-28 07:20:38 -05:00
INTAKE_SYSTEM_SPEC.md Initial commit from dev 2026-02-01 08:03:12 +00:00
SCHEMA.sql Initial commit 2026-02-01 02:43:27 -05:00
SCHEMA_OLD.sql Initial commit from dev 2026-02-01 08:03:12 +00:00
TODO.md Refactor: Remove legacy v2, data, roles modules; update auth, queries, translations, portal MCP tools 2026-02-13 15:30:22 -05:00
anthropic-submission.md Checkpoint: all pending changes across lib, portal, api, tools 2026-03-11 23:37:44 -04:00
api-design-2026-01.md Initial commit from dev 2026-02-01 08:03:12 +00:00
entry-layout.md Lab reference charts, import tracking, DossierFromEntry consolidation 2026-02-24 05:15:03 -05:00
journal-system-2026-02.md feat: fix year interpretation, new schedule format, exclude today from backfill 2026-02-09 02:00:18 -05:00
mcp-server-setup.md Refactor: Remove legacy v2, data, roles modules; update auth, queries, translations, portal MCP tools 2026-02-13 15:30:22 -05:00
mcp-usage-examples.md Initial commit from dev 2026-02-01 08:03:12 +00:00
prompts-ai-setup.md feat: add Terms of Service page and legal page updates 2026-02-08 04:59:59 -05:00
rbac-design-2026-01.md Initial commit from dev 2026-02-01 08:03:12 +00:00
rbac-redesign-2026-02.md refactor: complete RBAC redesign with hierarchical permissions 2026-02-11 00:06:02 -05:00
reference-mccalip-style.css Initial commit from dev 2026-02-01 08:03:12 +00:00
roadmap-context-aware-health-scheduling.md Refactor: Remove legacy v2, data, roles modules; update auth, queries, translations, portal MCP tools 2026-02-13 15:30:22 -05:00
schema-auth.sql Initial commit from dev 2026-02-01 08:03:12 +00:00
schema.sql Refactor: Remove legacy v2, data, roles modules; update auth, queries, translations, portal MCP tools 2026-02-13 15:30:22 -05:00
security-audit-2026-02-15.md Lab reference charts, import tracking, DossierFromEntry consolidation 2026-02-24 05:15:03 -05:00
store-consolidation-plan.md Initial commit from dev 2026-02-01 08:03:12 +00:00
study-access-in-entries.md Refactor: Remove legacy v2, data, roles modules; update auth, queries, translations, portal MCP tools 2026-02-13 15:30:22 -05:00
update-2026-01-19-portal-cleanup.md Initial commit from dev 2026-02-01 08:03:12 +00:00
viewport-plan.md Lab reference charts, import tracking, DossierFromEntry consolidation 2026-02-24 05:15:03 -05:00